Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | DD586_RS06455 | Not Available | + | 1438517 - 1439020 | 18548.3 |
| type vi secretion system contractile sheath large subunit | DD586_RS06460 | Not Available | + | 1439052 - 1440530 | 55245.7 |
| type vi secretion system baseplate subunit tsse | DD586_RS06465 | Not Available | + | 1440537 - 1440968 | 16273.3 |
| type vi secretion system baseplate subunit tssf | DD586_RS06470 | Not Available | + | 1440971 - 1442737 | 66968.1 |
| type vi secretion system baseplate subunit tssg | DD586_RS06475 | Not Available | + | 1442701 - 1443714 | 38214.4 |
| type vi secretion system-associated fha domain protein tagh | DD586_RS06480 | Not Available | + | 1443717 - 1444931 | 45169.9 |
| type vi secretion system lipoprotein tssj | DD586_RS06485 | Not Available | + | 1444931 - 1445467 | 19932.0 |
| type vi secretion system baseplate subunit tssk | DD586_RS06490 | Not Available | + | 1445470 - 1446807 | 49248.6 |
| type ivb secretion system protein icmh/dotu | DD586_RS06495 | Not Available | + | 1446824 - 1447600 | 30106.2 |
| type vi secretion system atpase tssh | DD586_RS06500 | Not Available | + | 1447616 - 1450216 | 95466.4 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling