Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | DD586_RS06160 | Not Available | - | 1364922 - 1365998 | 38430.0 |
| virk family protein | DD586_RS06165 | Not Available | - | 1366246 - 1366677 | 15506.5 |
| methionine--trna ligase | DD586_RS06170 | Not Available | - | 1366928 - 1368958 | 75557.0 |
| iron-sulfur cluster carrier protein apbc | DD586_RS06175 | Not Available | + | 1369240 - 1370349 | 39617.2 |
| uridine kinase | DD586_RS06180 | Not Available | + | 1370662 - 1371303 | 24512.9 |
| dctp deaminase | DD586_RS06185 | Not Available | + | 1371406 - 1371987 | 21200.5 |
| outer membrane assembly protein asma | DD586_RS06190 | Not Available | + | 1372020 - 1373834 | 65792.5 |
| terc family protein | DD586_RS06195 | Not Available | - | 1374020 - 1375609 | 59349.6 |
| polysaccharide export protein | DD586_RS06200 | Not Available | + | 1377064 - 1378200 | 41989.6 |
| protein-tyrosine-phosphatase | DD586_RS06205 | Not Available | + | 1378219 - 1378653 | 16245.5 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling