Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | DD586_RS05620 | Not Available | - | 1254853 - 1255980 | 41109.1 |
| arsc family reductase | DD586_RS05625 | Not Available | - | 1255961 - 1256344 | 14713.4 |
| protein ypfm | DD586_RS22445 | Not Available | + | 1256574 - 1256633 | 2351.94 |
| transcription antiterminator/rna stability regulator cspe | DD586_RS05630 | Not Available | + | 1257361 - 1257570 | 7395.75 |
| fluoride efflux transporter crcb | DD586_RS05635 | Not Available | - | 1257634 - 1258017 | 13786.2 |
| deaminated glutathione amidase | DD586_RS05640 | Not Available | + | 1258229 - 1259017 | 28679.1 |
| twin-arginine translocase subunit tate | DD586_RS05645 | Not Available | + | 1259179 - 1259388 | 7204.8 |
| lipoyl synthase | DD586_RS05650 | Not Available | - | 1259493 - 1260458 | 36309.0 |
| lipoyl(octanoyl) transferase lipb | DD586_RS05655 | Not Available | - | 1260649 - 1261359 | 26263.6 |
| duf493 family protein ybed | DD586_RS05660 | Not Available | - | 1261470 - 1261733 | 9786.9 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling