Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | DD586_RS05570 | Not Available | - | 1246051 - 1246518 | 17400.6 |
| glycine cleavage system transcriptional repressor | DD586_RS05575 | Not Available | - | 1246521 - 1247090 | 20840.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DD586_RS05580 | Not Available | + | 1247238 - 1248116 | 31278.8 |
| outer membrane protein assembly factor bamc | DD586_RS05585 | Not Available | + | 1248133 - 1249173 | 37926.7 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DD586_RS05590 | Not Available | + | 1249295 - 1250008 | 26853.5 |
| duf441 domain-containing protein | DD586_RS05595 | Not Available | + | 1250322 - 1250774 | 15570.9 |
| trna(met) cytidine acetyltransferase tmca | DD586_RS05600 | Not Available | + | 1250794 - 1252812 | 75028.0 |
| esterase | DD586_RS05605 | Not Available | + | 1253051 - 1253737 | 25484.6 |
| ypfn family protein | DD586_RS05610 | Not Available | - | 1253863 - 1254051 | 7504.06 |
| m15 family metallopeptidase | DD586_RS05615 | Not Available | - | 1254173 - 1254856 | 25517.1 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling