Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | DD586_RS05075 | Not Available | - | 1125305 - 1127167 | 67510.5 |
| (2e,6e)-farnesyl diphosphate synthase | DD586_RS05080 | Not Available | - | 1127200 - 1128111 | 32567.0 |
| exodeoxyribonuclease vii small subunit | DD586_RS05085 | Not Available | - | 1128108 - 1128356 | 9145.73 |
| trna uracil 4-sulfurtransferase thii | DD586_RS05090 | Not Available | + | 1128625 - 1130073 | 54807.9 |
| protein deglycase yajl | DD586_RS05095 | Not Available | - | 1130141 - 1130737 | 21005.5 |
| 2-dehydropantoate 2-reductase | DD586_RS05100 | Not Available | - | 1130700 - 1131620 | 33977.9 |
| yajq family cyclic di-gmp-binding protein | DD586_RS05105 | Not Available | + | 1131802 - 1132293 | 18348.9 |
| mfs transporter | DD586_RS05110 | Not Available | - | 1132448 - 1133821 | 49009.6 |
| heme o synthase | DD586_RS05115 | Not Available | - | 1133972 - 1134862 | 32294.7 |
| cytochrome o ubiquinol oxidase subunit iv | DD586_RS05120 | Not Available | - | 1134879 - 1135211 | 11976.0 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling