Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | DD586_RS05020 | Not Available | + | 1114170 - 1116017 | 66613.3 |
| protein translocase subunit secf | DD586_RS05025 | Not Available | + | 1116028 - 1116999 | 35280.6 |
| duf3251 domain-containing protein | DD586_RS05030 | Not Available | - | 1117079 - 1117648 | 20624.8 |
| magnesium-translocating p-type atpase | DD586_RS05035 | Not Available | - | 1117828 - 1120539 | 100683.0 |
| transcriptional regulator nrdr | DD586_RS05045 | Not Available | + | 1121005 - 1121454 | 17111.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DD586_RS05050 | Not Available | + | 1121520 - 1122632 | 40043.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | DD586_RS05055 | Not Available | + | 1122754 - 1123227 | 16452.8 |
| transcription antitermination factor nusb | DD586_RS05060 | Not Available | + | 1123250 - 1123669 | 15623.8 |
| thiamine-phosphate kinase | DD586_RS05065 | Not Available | + | 1123731 - 1124705 | 34709.2 |
| phosphatidylglycerophosphatase a | DD586_RS05070 | Not Available | + | 1124686 - 1125195 | 18705.4 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling