Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DD586_RS04675 | Not Available | + | 1033489 - 1034682 | 42691.3 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | DD586_RS04680 | Not Available | + | 1034864 - 1035625 | 28597.9 |
| phosphatidate cytidylyltransferase | DD586_RS04685 | Not Available | + | 1035635 - 1036492 | 31514.7 |
| sigma e protease regulator rsep | DD586_RS04690 | Not Available | + | 1036514 - 1037869 | 49355.5 |
| outer membrane protein assembly factor bama | DD586_RS04695 | Not Available | + | 1037904 - 1040321 | 88806.4 |
| molecular chaperone skp | DD586_RS04700 | Not Available | + | 1040459 - 1040956 | 18414.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DD586_RS04705 | Not Available | + | 1040960 - 1041985 | 35712.3 |
| 3-hydroxyacyl-acp dehydratase fabz | DD586_RS04710 | Not Available | + | 1042137 - 1042592 | 17217.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DD586_RS04715 | Not Available | + | 1042596 - 1043384 | 27973.6 |
| lipid-a-disaccharide synthase | DD586_RS04720 | Not Available | + | 1043388 - 1044536 | 42781.6 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling