Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya parazeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles-Chains |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya parazeae Ech586
Accession NumberNC_013592.1
Gene Summary
Adenine Count
1117418 bp
Thymine Count
1116434 bp
Guanine Count
1292424 bp
Cytosine Count
1292118 bp
Genome Length
4818394 bp
Protein-coding Genes
4079 genes
Non-Coding Genes
213 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease muth | DD586_RS04475 | Not Available | - | 995174 - 995860 | 25311.7 |
| hypothetical protein | DD586_RS21950 | Not Available | - | 996057 - 996221 | 5744.97 |
| rna pyrophosphohydrolase | DD586_RS04485 | Not Available | + | 996633 - 997160 | 20727.0 |
| phosphoenolpyruvate--protein phosphotransferase | DD586_RS04490 | Not Available | + | 997175 - 999421 | 83787.5 |
| prolipoprotein diacylglyceryl transferase | DD586_RS04495 | Not Available | + | 999657 - 1000520 | 32412.1 |
| thymidylate synthase | DD586_RS04500 | Not Available | + | 1000552 - 1001346 | 30470.5 |
| prepilin peptidase-dependent protein | DD586_RS04505 | Not Available | + | 1001597 - 1002088 | 18153.1 |
| prepilin peptidase-dependent protein | DD586_RS04510 | Not Available | + | 1002082 - 1002675 | 22076.5 |
| ygdb family protein | DD586_RS04515 | Not Available | + | 1002776 - 1003180 | 15288.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DD586_RS04520 | Not Available | + | 1003164 - 1003550 | 14456.5 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling