Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis thailandensis |
| Strain | JCM 16380 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459846 bp
Thymine Count
1460422 bp
Guanine Count
3221154 bp
Cytosine Count
3206841 bp
Genome Length
9348263 bp
Protein-coding Genes
8331 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Small terminase | CFP71_21345 | Not Available | + | 4723819 - 4724277 | 16201.4 |
| Terminase large subunit | CFP71_21350 | Not Available | + | 4724237 - 4725928 | 63706.8 |
| hypothetical protein | CFP71_21355 | Not Available | - | 4725918 - 4726319 | 14381.8 |
| Portal protein | CFP71_21360 | Not Available | + | 4726452 - 4727897 | 54020.1 |
| Capsid maturation protease | CFP71_21365 | Not Available | + | 4727901 - 4728881 | 34971.0 |
| Scaffolding protein | CFP71_21370 | Not Available | + | 4728972 - 4729613 | 23352.4 |
| Capsid protein | CFP71_21375 | Not Available | + | 4729664 - 4730653 | 35541.7 |
| Hypothetical protein | CFP71_21380 | Not Available | + | 4730766 - 4730975 | 7363.66 |
| hypothetical protein | CFP71_21385 | Not Available | + | 4730979 - 4731338 | 11973.2 |
| Minor capsid subunit | CFP71_21390 | Not Available | + | 4731365 - 4731667 | 10681.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.