Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | ECS88_RS00005 | P56979 | + | 132 - 872 | 28192.5 |
| repb family plasmid replication initiator protein | ECS88_RS00010 | P0A254 | - | 1157 - 2134 | 37317.0 |
| integrase core domain-containing protein | ECS88_RS00020 | P15025 | + | 2880 - 3203 | 12961.1 |
| integrase core domain-containing protein | ECS88_RS27595 | P15026 | + | 3205 - 3309 | 3832.48 |
| integrase core domain-containing protein | ECS88_RS00030 | P18642 | + | 3370 - 3883 | 17986.5 |
| is1-like element is1a family transposase | ECS88_RS00035 | Not Available | - | 4063 - 4760 | 26483.3 |
| ferric aerobactin receptor iuta | ECS88_RS00050 | Q6U607 | - | 5285 - 7486 | 80828.3 |
| integrase core domain-containing protein | ECS88_RS00055 | P11295 | - | 7512 - 8845 | 50857.9 |
| nis family aerobactin synthetase iucc | ECS88_RS00060 | Q47318 | - | 8842 - 10584 | 66731.5 |
| n(6)-hydroxylysine o-acetyltransferase iucb | ECS88_RS00065 | Q47317 | - | 10584 - 11531 | 37148.1 |
Pathways
12520 pathways






