Caulobacter vibrioides NA1000

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Caulobacter

Description

Caulobacter vibrioides NA1000 is a Gram-negative, rod-shaped bacterium that typically exists as single cells, demonstrating a distinctive morphology within its genus. This microbe thrives in aquatic environments, where it plays a significant role in the microbial community. Its optimal growth temperature is approximately 35.0 °C, suggesting a preference for mesophilic conditions, which are common in many freshwater ecosystems. As an aerobic organism, C. vibrioides NA1000 requires oxygen for its metabolic processes, positioning it within the diverse group of microorganisms that contribute to nutrient cycling in aquatic habitats. The single-cell arrangement allows for efficient nutrient uptake and adaptability to varying environmental conditions, enhancing its survival in fluctuating ecosystems. The ecological role of Caulobacter vibrioides NA1000 may extend beyond simple nutrient cycling; its presence in aquatic environments may influence biofilm formation and surface colonization dynamics, which are crucial for the stability and functionality of these ecosystems. The ability of this bacterium to thrive in aerobic conditions, coupled with its morphological characteristics, suggests it may engage in complex interactions with other microbial species, thereby contributing to the overall biodiversity and ecological resilience of its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusCaulobacter
SpeciesCaulobacter vibrioides
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Caulobacter vibrioides NA1000
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caulobacter vibrioides NA1000


Gene Summary

Adenine Count

665933 bp

Thymine Count

661294 bp

Guanine Count

1355748 bp

Cytosine Count

1359954 bp

Genome Length

4042929 bp

Protein-coding Genes

3871 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gta-gp10 phage tail tube proteinCCNA_02869Not Available-3020328 - 30206129309.35
Gene transfer aget (gta) orfg9-like phage major tail proteinCCNA_02870Not Available-3020768 - 302118414432.1
Hypothetical proteinCCNA_02871Not Available-3021200 - 302159813696.7
Head-tail connector proteinCCNA_03882Not Available-3021595 - 30218769818.9
Major capsid proteinCCNA_02872Not Available-3022019 - 302323943646.9
glyoxalase/bleomycin resistance protein, dioxygenase superfamilyCCNA_02873Not Available+3023436 - 302379813304.8
Putative prohead proteaseCCNA_02874Not Available-3023772 - 302418814949.0
hypothetical proteinCCNA_02875Not Available-3024178 - 302457614708.8
Portal proteinCCNA_02877Not Available-3024589 - 302591747700.9
very short patch repair (vsr) endonucleaseCCNA_02876Not Available+3025889 - 302632916269.7

Displaying genes 11 – 20 of 4097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

841 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 841 metabolites