Caulobacter vibrioides str. T5M6

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Caulobacter

Description

Caulobacter vibrioides str. T5M6 is a Gram-negative, rod-shaped bacterium that predominantly exists as single cells. This microorganism thrives in aquatic environments, demonstrating an optimal growth temperature of 35.0°C and requiring oxygen for aerobic respiration. C. vibrioides species are characterized by their distinctive life cycle, which includes a polar flagellum and the formation of a stalked cell that allows for attachment to surfaces in aquatic habitats. This adaptation is significant for survival and nutrient acquisition in varied environments. The ability of C. vibrioides str. T5M6 to thrive under aerobic conditions may influence its ecological role, particularly in nutrient cycling within aquatic ecosystems. The presence of this strain in freshwater or marine environments could provide insights into the dynamics of microbial communities, especially regarding its potential interactions with other microorganisms and its role in biofilm formation. The understanding of C. vibrioides str. T5M6’s life cycle and environmental preferences may contribute to broader studies on microbial ecology and the functional diversity of aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusCaulobacter
SpeciesCaulobacter vibrioides
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Caulobacter vibrioides str. T5M6
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caulobacter vibrioides str. T5M6

Accession NumberLNIY00000000.1

Gene Summary

Adenine Count

812121 bp

Thymine Count

816834 bp

Guanine Count

1843606 bp

Cytosine Count

1849616 bp

Genome Length

5322177 bp

Protein-coding Genes

4642 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+19 - 133Not Available
23s ribosomal rnaNot AvailableNot Available+233 - 3022Not Available
tat pathway signal sequence domain proteinAS593_06480O31530-139 - 2919101940.0
16s ribosomal rnaNot AvailableNot Available+3620 - 5109Not Available
aminotransferaseAS593_06485P96847-3034 - 417941021.1
aminoacyl-trna deacylaseAS593_06490P37174+4271 - 474416129.6
Ncrna_class:rnase_p_rnaNot AvailableNot Available+5301 - 5682Not Available
hypothetical proteinAS593_06495Not Available-4860 - 553123756.8
pp_00005AS593_06500Not Available-5599 - 6660Not Available
integraseAS593_06505Not Available+6745 - 780339898.7

Displaying genes 1 – 10 of 3456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

256 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000468D-galactono-1,5-lactoneC6H10O6Chemical structure of D-galactono-1,5-lactoneNot available
Average178.14Da
Monoisotopic178.047738052Da

Displaying 1–10 of 256 metabolites