Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preq(1) synthase | PLIM_RS14000 | Q7UVG9 | - | 3534502 - 3534858 | 13332.0 |
| twin-arginine translocase tata/tate family subunit | PLIM_RS14005 | B4SE06 | - | 3534946 - 3535218 | 9665.73 |
| twin-arginine translocase tata/tate family subunit | PLIM_RS14010 | Not Available | - | 3535401 - 3535583 | 6642.2 |
| hypothetical protein | PLIM_RS14015 | Not Available | - | 3536184 - 3537443 | 45701.2 |
| methionyl-trna formyltransferase | PLIM_RS14030 | A0L3X7 | + | 3538059 - 3539063 | 36193.6 |
| 6-phosphogluconolactonase | PLIM_RS14035 | Not Available | + | 3539173 - 3540123 | 35408.4 |
| serine hydrolase | PLIM_RS24575 | D5EXZ4 | + | 3540177 - 3542099 | 72001.1 |
| co-chaperone groes | PLIM_RS14045 | Not Available | + | 3542208 - 3542564 | 13475.4 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS14050 | Not Available | + | 3542740 - 3544332 | 57866.6 |
| pvc-type heme-binding cxxch protein | PLIM_RS14055 | Not Available | + | 3544490 - 3547744 | 120098.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
