Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | PLIM_RS08900 | Q7UJ86 | - | 2227382 - 2229019 | 60633.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | PLIM_RS08905 | Q3A370 | - | 2229158 - 2229913 | 27872.4 |
| pas domain s-box protein | PLIM_RS22710 | Not Available | + | 2230499 - 2232877 | 89992.6 |
| response regulator transcription factor | PLIM_RS08915 | P26487 | + | 2232994 - 2233689 | 26388.0 |
| had hydrolase-like protein | PLIM_RS08920 | Q9I767 | + | 2233804 - 2234472 | 24839.4 |
| hypothetical protein | PLIM_RS22715 | Not Available | + | 2234680 - 2235357 | 24185.8 |
| threonine/serine dehydratase | PLIM_RS08930 | A1B8Z2 | + | 2235496 - 2236458 | 33978.9 |
| c-type cytochrome | PLIM_RS08935 | Not Available | - | 2236578 - 2239811 | 118019.0 |
| nad(p)/fad-dependent oxidoreductase | PLIM_RS08940 | Not Available | - | 2239933 - 2241240 | 47720.0 |
| glycosyl hydrolase family 28-related protein | PLIM_RS08945 | Not Available | - | 2241342 - 2244089 | 101617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
