Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Genus

Candidatus Azobacteroides

Description

Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2. Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 was isolated from a single cell of the protist Pseudotrichonympha grassii which resides in the termite gut. The genome sequence of this organism will provide information on the proteins involved in endosymbiosis. (NCBI BioProject: bp_list[1])

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipNot Available
Host(s)Pseudotrichonympha grassii
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2

NC_011564.1NC_011565.1NC_011563.1NC_011561.1

Gene Summary

Adenine Count

374364 bp

Thymine Count

375970 bp

Guanine Count

179112 bp

Cytosine Count

184760 bp

Genome Length

1114206 bp

Protein-coding Genes

876 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
replication initiation proteinCFPG_RS05210Not Available+1 - 159962613.6
hypothetical proteinCFPG_RS04515Not Available+1657 - 205815731.9
hypothetical proteinCFPG_RS04520Not Available+2048 - 311839777.6
hypothetical proteinCFPG_RS04525Not Available+3125 - 392531445.6
hypothetical proteinCFPG_RS04530Not Available+4643 - 495111673.1
hypothetical proteinCFPG_RS04535Not Available+5002 - 530411310.6
replication initiation proteinCFPG_RS05215Not Available+5673 - 726862235.1
dna methyltransferaseCFPG_RS04545Not Available+7394 - 861447068.6
mvai/bcni family restriction endonucleaseCFPG_RS05695Not Available+8628 - 893911716.4
mvai/bcni family restriction endonucleaseCFPG_RS05700Not Available+8929 - 931815057.2

Displaying genes 1 – 10 of 1013 in total

Metabolites

146 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da

Displaying 1–10 of 146 metabolites