Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hsp15 | SAMN05216266_10125 | Not Available | - | 23313 - 23678 | 13273.9 |
| fatty-acyl-coa synthase | SAMN05216266_10127 | Not Available | - | 23943 - 25484 | 54748.6 |
| protein of unknown function | SAMN05216266_10128 | Not Available | - | 25617 - 25868 | 9035.38 |
| s-adenosyl methyltransferase | SAMN05216266_10129 | Not Available | - | 26244 - 27095 | 30899.5 |
| helix-turn-helix domain-containing protein | SAMN05216266_10130 | Not Available | - | 27173 - 28030 | 32387.6 |
| 6-phosphogluconate dehydrogenase | SAMN05216266_10131 | Not Available | + | 28264 - 29715 | 51827.9 |
| trypsin | SAMN05216266_10132 | Not Available | - | 29773 - 30543 | 25655.7 |
| potassium uptake protein, trkh family | SAMN05216266_10133 | Not Available | + | 30805 - 32172 | 48090.8 |
| trk system potassium uptake protein trka | SAMN05216266_10134 | Not Available | + | 32165 - 32830 | 24078.8 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05216266_10135 | Not Available | - | 32875 - 33306 | 15493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
