Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216266_1015 | Not Available | - | 3813 - 4217 | 15018.7 |
| espg family protein | SAMN05216266_1016 | Not Available | - | 4256 - 5095 | 29728.2 |
| transcriptional regulator, tetr family | SAMN05216266_1017 | Not Available | - | 5413 - 6039 | 23155.6 |
| short-chain dehydrogenase | SAMN05216266_1018 | Not Available | + | 6136 - 7026 | 31842.0 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05216266_1019 | Not Available | + | 7034 - 8014 | 35635.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216266_10110 | Not Available | - | 8016 - 8933 | 33136.2 |
| membrane protein deda, snare-associated domain | SAMN05216266_10111 | Not Available | + | 9088 - 9642 | 19339.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05216266_10112 | Not Available | - | 9774 - 10682 | 32737.5 |
| o-acetylserine/cysteine efflux transporter | SAMN05216266_10113 | Not Available | + | 10819 - 11757 | 33125.6 |
| putative nadh-flavin reductase | SAMN05216266_10114 | Not Available | - | 11763 - 12404 | 22368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
