Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | SAMN04488101_101501 | Not Available | + | 596381 - 596974 | 22067.0 |
| putative mrna 3-end processing factor | SAMN04488101_101502 | Not Available | + | 596974 - 597915 | 35790.3 |
| hypothetical protein | SAMN04488101_101503 | Not Available | + | 597915 - 598073 | 6238.46 |
| dna-binding transcriptional regulator, marr family | SAMN04488101_101504 | Not Available | + | 598085 - 598534 | 17064.8 |
| zinc transporter zupt | SAMN04488101_101505 | Not Available | - | 598531 - 599268 | 26855.3 |
| undecaprenyl-diphosphatase | SAMN04488101_101506 | Not Available | - | 599268 - 599831 | 21494.0 |
| methyltransferase domain-containing protein | SAMN04488101_101507 | Not Available | - | 599828 - 600559 | 28661.1 |
| phosphomannomutase | SAMN04488101_101508 | Not Available | + | 600716 - 602104 | 50234.5 |
| cysteine desulfurase | SAMN04488101_101509 | Not Available | + | 602111 - 603259 | 42118.3 |
| hypothetical protein | SAMN04488101_101510 | Not Available | + | 603338 - 603544 | 7639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.