Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. V48
Accession NumberAWRU00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | N824_29760 | Not Available | + | 4550019 - 4550142 | 4441.47 |
| Capsid protein | N824_29765 | Not Available | + | 4550179 - 4551462 | 48485.4 |
| Major spike protein | N824_29770 | Not Available | + | 4551573 - 4552100 | 18621.2 |
| Minor spike protein | N824_29775 | Not Available | + | 4552109 - 4553095 | 34449.3 |
| Dna replication initiation protein gpa | N824_29780 | Not Available | + | 4553132 - 4554700 | 59683.0 |
| C | N824_29785 | Not Available | + | 4554697 - 4554957 | 10081.0 |
| External scaffolding protein | N824_29790 | Not Available | + | 4554954 - 4555412 | 16938.3 |
| Dna packaging protein | N824_29795 | Not Available | + | 4555412 - 4555528 | 4227.24 |
| Capsid protein | N824_29800 | Not Available | + | 4555565 - 4556848 | 48384.3 |
| Major spike protein | N824_29805 | Not Available | + | 4556959 - 4557486 | 19048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.