Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488101_1278 | Not Available | + | 6035512 - 6036285 | 29250.5 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04488101_1279 | Not Available | + | 6036333 - 6036872 | 19959.3 |
| hypothetical protein | SAMN04488101_12710 | Not Available | + | 6036907 - 6037719 | 30369.9 |
| dihydrofolate reductase | SAMN04488101_12711 | Not Available | - | 6037790 - 6038341 | 20493.8 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488101_12712 | Not Available | - | 6038344 - 6039570 | 45582.2 |
| nad(p)h-dependent fmn reductase | SAMN04488101_12713 | Not Available | + | 6039888 - 6040472 | 21141.5 |
| hypothetical protein | SAMN04488101_12714 | Not Available | + | 6040563 - 6040841 | 10909.2 |
| pa14 domain-containing protein | SAMN04488101_12715 | Not Available | + | 6041146 - 6046770 | 192741.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_1281 | Not Available | + | 6046845 - 6048281 | 55938.5 |
| bro family, n-terminal domain | SAMN04488101_1282 | Not Available | + | 6048505 - 6049221 | 27888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.