Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488101_101481 | Not Available | + | 572164 - 573612 | 53703.2 |
| thioredoxin-like | SAMN04488101_101482 | Not Available | + | 573629 - 574828 | 45129.2 |
| thioredoxin-like | SAMN04488101_101483 | Not Available | + | 574917 - 576101 | 44750.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101484 | Not Available | + | 576497 - 577099 | 22854.0 |
| fecr family protein | SAMN04488101_101485 | Not Available | + | 577162 - 578355 | 43733.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101486 | Not Available | + | 578573 - 581965 | 126772.0 |
| susd family protein | SAMN04488101_101487 | Not Available | + | 581994 - 583385 | 53016.6 |
| protein of unknown function | SAMN04488101_101488 | Not Available | + | 583399 - 584160 | 29632.8 |
| pkd-like family protein | SAMN04488101_101489 | Not Available | + | 584186 - 585838 | 60492.9 |
| poly(3-hydroxybutyrate) depolymerase | SAMN04488101_101490 | Not Available | + | 585862 - 587640 | 65137.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.