Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | SAMN04488101_12347 | Not Available | - | 5898551 - 5898964 | 16094.6 |
| two component transcriptional regulator, lyttr family | SAMN04488101_12348 | Not Available | - | 5899298 - 5900035 | 27734.8 |
| histidine kinase | SAMN04488101_12349 | Not Available | - | 5900013 - 5901074 | 40642.0 |
| predicted membrane protein | SAMN04488101_12350 | Not Available | - | 5901085 - 5901861 | 28395.8 |
| large conductance mechanosensitive channel | SAMN04488101_12351 | Not Available | - | 5902082 - 5902513 | 15310.2 |
| orf6n domain-containing protein | SAMN04488101_12352 | Not Available | - | 5902597 - 5902887 | 11336.7 |
| hypothetical protein | SAMN04488101_12353 | Not Available | - | 5903316 - 5903510 | 7408.86 |
| d-glucuronate isomerase | SAMN04488101_1241 | Not Available | - | 5904003 - 5905403 | 53629.4 |
| altronate hydrolase | SAMN04488101_1242 | Not Available | - | 5905455 - 5907107 | 59103.3 |
| tagaturonate reductase | SAMN04488101_1243 | Not Available | - | 5907107 - 5908624 | 56088.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.