Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa epimerase | SAMN04488101_12327 | Not Available | - | 5879042 - 5879443 | 14708.8 |
| cysteine desulfurase iscs | SAMN04488101_12328 | Not Available | + | 5879567 - 5880778 | 44302.2 |
| nitrogen fixation protein nifu | SAMN04488101_12329 | Not Available | + | 5880822 - 5881235 | 14936.8 |
| iron-sulfur cluster assembly protein | SAMN04488101_12330 | Not Available | + | 5881292 - 5881618 | 11878.9 |
| long-chain acyl-coa synthetase | SAMN04488101_12331 | Not Available | + | 5881699 - 5883612 | 71634.8 |
| lysyl-trna synthetase, class ii | SAMN04488101_12332 | Not Available | + | 5883740 - 5885461 | 65347.7 |
| hypothetical protein | SAMN04488101_12333 | Not Available | + | 5885547 - 5885762 | 8469.82 |
| hypothetical protein | SAMN04488101_12334 | Not Available | - | 5885809 - 5886348 | 20669.8 |
| uracil-dna glycosylase | SAMN04488101_12335 | Not Available | + | 5886503 - 5887180 | 24934.9 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN04488101_12336 | Not Available | - | 5887237 - 5887707 | 17972.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.