Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_12211 | Not Available | - | 5816302 - 5819787 | 128860.0 |
| fecr family protein | SAMN04488101_12212 | Not Available | - | 5819988 - 5821139 | 42581.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_12213 | Not Available | - | 5821205 - 5821777 | 22313.3 |
| arylsulfatase a | SAMN04488101_12214 | Not Available | - | 5822054 - 5823466 | 52627.8 |
| arylsulfatase a | SAMN04488101_12215 | Not Available | - | 5823468 - 5825009 | 55594.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_12216 | Not Available | - | 5825119 - 5826225 | 41214.9 |
| disulphide bond corrector protein dsbc | SAMN04488101_12217 | Not Available | - | 5826237 - 5826686 | 16574.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_12218 | Not Available | - | 5826692 - 5827846 | 43053.5 |
| susd family protein | SAMN04488101_12219 | Not Available | - | 5827858 - 5829261 | 51015.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_12220 | Not Available | - | 5829279 - 5832833 | 129582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.