Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101441 | Not Available | + | 521356 - 521811 | 18644.1 |
| peroxiredoxin | SAMN04488101_101442 | Not Available | + | 521864 - 522376 | 19532.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_101443 | Not Available | + | 522566 - 523543 | 37137.2 |
| hypothetical protein | SAMN04488101_101444 | Not Available | + | 523550 - 524476 | 34442.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04488101_101445 | Not Available | - | 524501 - 525394 | 34507.0 |
| histidine ammonia-lyase | SAMN04488101_101446 | Not Available | + | 525471 - 527048 | 56650.6 |
| urocanate hydratase | SAMN04488101_101447 | Not Available | + | 527090 - 529093 | 73858.0 |
| hypothetical protein | SAMN04488101_101448 | Not Available | - | 529095 - 529793 | 25324.8 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488101_101449 | Not Available | - | 529856 - 530356 | 18982.4 |
| transcriptional regulator, arsr family | SAMN04488101_101450 | Not Available | - | 530343 - 530684 | 13033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.