Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101301 | Not Available | - | 335101 - 335940 | 32273.6 |
| hypothetical protein | SAMN04488101_101302 | Not Available | + | 336932 - 337375 | 16914.4 |
| protein of unknown function | SAMN04488101_101303 | Not Available | + | 337450 - 337929 | 17402.0 |
| protein of unknown function | SAMN04488101_101304 | Not Available | + | 337992 - 338567 | 20734.2 |
| haem-binding domain-containing protein | SAMN04488101_101305 | Not Available | + | 338572 - 339036 | 17810.6 |
| copper-resistance protein, copa family | SAMN04488101_101306 | Not Available | + | 339040 - 341526 | 94271.5 |
| cu2+-exporting atpase | SAMN04488101_101307 | Not Available | + | 341541 - 344063 | 90374.4 |
| hypothetical protein | SAMN04488101_101308 | Not Available | - | 344190 - 344495 | 11909.2 |
| transcriptional regulator, gntr family | SAMN04488101_101309 | Not Available | + | 344536 - 345216 | 26066.4 |
| enoyl-(acyl carrier protein) reductase | SAMN04488101_101310 | Not Available | + | 345332 - 345592 | 8794.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.