Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_102102 | Not Available | + | 1113197 - 1113832 | 23698.5 |
| aminopeptidase n | SAMN04488101_102103 | Not Available | - | 1114135 - 1116108 | 74298.2 |
| hypothetical protein | SAMN04488101_102104 | Not Available | - | 1116180 - 1116917 | 28055.9 |
| arsenate reductase | SAMN04488101_102105 | Not Available | - | 1117023 - 1117370 | 13070.7 |
| histidine kinase | SAMN04488101_102106 | Not Available | + | 1117581 - 1119047 | 55630.6 |
| two component transcriptional regulator, lyttr family | SAMN04488101_102107 | Not Available | + | 1119057 - 1119743 | 25798.4 |
| signal transduction histidine kinase | SAMN04488101_102108 | Not Available | + | 1119843 - 1122581 | 102324.0 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04488101_102109 | Not Available | + | 1122618 - 1123325 | 26464.6 |
| chemotaxis protein methyltransferase cher | SAMN04488101_102110 | Not Available | + | 1123327 - 1124151 | 31917.0 |
| signal transduction histidine kinase | SAMN04488101_102111 | Not Available | + | 1124188 - 1125774 | 59217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.