Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l24 | SAMN04488101_10282 | Not Available | - | 1101533 - 1101871 | 11914.8 |
| lsu ribosomal protein l14p | SAMN04488101_10283 | Not Available | - | 1101873 - 1102241 | 13364.4 |
| small subunit ribosomal protein s17 | SAMN04488101_10284 | Not Available | - | 1102243 - 1102497 | 9784.19 |
| large subunit ribosomal protein l29 | SAMN04488101_10285 | Not Available | - | 1102511 - 1102720 | 7780.33 |
| lsu ribosomal protein l16p | SAMN04488101_10286 | Not Available | - | 1102793 - 1103215 | 15948.9 |
| ssu ribosomal protein s3p | SAMN04488101_10287 | Not Available | - | 1103254 - 1104108 | 30817.2 |
| large subunit ribosomal protein l22 | SAMN04488101_10288 | Not Available | - | 1104114 - 1104476 | 13688.8 |
| small subunit ribosomal protein s19 | SAMN04488101_10289 | Not Available | - | 1104484 - 1104750 | 10003.1 |
| lsu ribosomal protein l2p | SAMN04488101_10290 | Not Available | - | 1104750 - 1105574 | 29841.2 |
| large subunit ribosomal protein l23 | SAMN04488101_10291 | Not Available | - | 1105598 - 1105888 | 10750.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.