Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abi-like protein | SAMN04488101_101731 | Not Available | + | 855086 - 855610 | 20356.2 |
| abi-like protein | SAMN04488101_101732 | Not Available | + | 855592 - 856035 | 17542.4 |
| arac-type dna-binding protein | SAMN04488101_101733 | Not Available | + | 856140 - 857009 | 33789.9 |
| acetyltransferase (isoleucine patch superfamily) | SAMN04488101_101734 | Not Available | + | 857096 - 857686 | 21557.9 |
| hypothetical protein | SAMN04488101_101735 | Not Available | + | 857699 - 858751 | 39092.7 |
| hypothetical protein | SAMN04488101_101736 | Not Available | - | 858795 - 859007 | 7652.78 |
| hypothetical protein | SAMN04488101_101737 | Not Available | + | 859049 - 859174 | 4749.81 |
| dimerisation domain-containing protein | SAMN04488101_101738 | Not Available | + | 859196 - 860236 | 38565.4 |
| hypothetical protein | SAMN04488101_101739 | Not Available | - | 860338 - 860649 | 11230.7 |
| hypothetical protein | SAMN04488101_101740 | Not Available | + | 860939 - 861121 | 6648.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.