Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wg containing repeat-containing protein | SAMN04488101_101711 | Not Available | - | 835443 - 837194 | 67324.2 |
| hypothetical protein | SAMN04488101_101712 | Not Available | + | 837633 - 837782 | 5528.69 |
| hypothetical protein | SAMN04488101_101713 | Not Available | + | 837837 - 838610 | 29106.8 |
| hypothetical protein | SAMN04488101_101714 | Not Available | - | 838947 - 839516 | 21326.9 |
| hypothetical protein | SAMN04488101_101715 | Not Available | - | 839604 - 839819 | 8297.71 |
| bro family, n-terminal domain | SAMN04488101_101716 | Not Available | - | 839836 - 840654 | 30883.2 |
| hypothetical protein | SAMN04488101_101717 | Not Available | - | 840734 - 841591 | 33599.9 |
| hypothetical protein | SAMN04488101_101718 | Not Available | - | 841603 - 842433 | 31582.3 |
| hypothetical protein | SAMN04488101_101719 | Not Available | + | 842517 - 842666 | 5396.6 |
| hypothetical protein | SAMN04488101_101720 | Not Available | + | 842832 - 843131 | 11441.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.