Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sir2-like domain-containing protein | SAMN04488101_101641 | Not Available | + | 765081 - 766250 | 44297.6 |
| hypothetical protein | SAMN04488101_101642 | Not Available | + | 766250 - 768118 | 71217.1 |
| hypothetical protein | SAMN04488101_101643 | Not Available | + | 768259 - 769422 | 44757.2 |
| hypothetical protein | SAMN04488101_101644 | Not Available | - | 769458 - 770648 | 45400.3 |
| hypothetical protein | SAMN04488101_101645 | Not Available | - | 770654 - 771874 | 46682.8 |
| hypothetical protein | SAMN04488101_101646 | Not Available | - | 772295 - 772777 | 17789.7 |
| sensor domain chase3-containing protein | SAMN04488101_101647 | Not Available | + | 772969 - 773889 | 35145.7 |
| hypothetical protein | SAMN04488101_101648 | Not Available | + | 773893 - 774906 | 39721.1 |
| abortive infection protein, abiv family | SAMN04488101_101649 | Not Available | - | 775088 - 775879 | 30716.1 |
| hypothetical protein | SAMN04488101_101650 | Not Available | - | 775943 - 776656 | 27745.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.