Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lysine 6-transaminase precursor | SAMN04488101_10145 | Not Available | - | 55735 - 57066 | 49938.1 |
| sugar lactone lactonase yvre | SAMN04488101_10146 | Not Available | - | 57328 - 58227 | 32895.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_10147 | Not Available | + | 58964 - 62152 | 116785.0 |
| susd family protein | SAMN04488101_10148 | Not Available | + | 62163 - 63611 | 53491.8 |
| predicted acyltransferase | SAMN04488101_10149 | Not Available | + | 63732 - 64859 | 42205.7 |
| heparin/heparan-sulfate lyase | SAMN04488101_10150 | Not Available | + | 64870 - 67650 | 104314.0 |
| transcriptional regulator, gntr family | SAMN04488101_10151 | Not Available | + | 67759 - 68397 | 24374.3 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04488101_10152 | Not Available | + | 68623 - 69957 | 48911.3 |
| galactonate dehydratase | SAMN04488101_10153 | Not Available | + | 70039 - 71217 | 44238.0 |
| glucose 1-dehydrogenase | SAMN04488101_10154 | Not Available | + | 71235 - 72008 | 27765.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.