Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101571 | Not Available | - | 687417 - 687857 | 16341.4 |
| putative abc transport system permease protein | SAMN04488101_101572 | Not Available | - | 687874 - 689127 | 45930.7 |
| putative abc transport system atp-binding protein | SAMN04488101_101573 | Not Available | - | 689124 - 689753 | 22767.4 |
| hypothetical protein | SAMN04488101_101574 | Not Available | + | 690029 - 690178 | 5732.12 |
| atpase components of abc transporters with duplicated atpase domains | SAMN04488101_101575 | Not Available | - | 690162 - 691787 | 61327.9 |
| hypothetical protein | SAMN04488101_101576 | Not Available | + | 691927 - 692205 | 10318.4 |
| hypothetical protein | SAMN04488101_101577 | Not Available | + | 692285 - 692806 | 20143.1 |
| nitroreductase | SAMN04488101_101578 | Not Available | + | 692828 - 693403 | 21823.3 |
| transcription elongation factor, grea/greb family | SAMN04488101_101579 | Not Available | + | 693388 - 693852 | 17082.2 |
| polysaccharide deacetylase | SAMN04488101_101580 | Not Available | - | 693856 - 694713 | 32218.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.