Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna processing protein | SAMN04488101_101531 | Not Available | + | 625689 - 626780 | 40231.2 |
| cystathionine beta-synthase | SAMN04488101_101532 | Not Available | + | 626932 - 628293 | 50016.9 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN04488101_101533 | Not Available | - | 628414 - 629739 | 48191.1 |
| protein of unknown function | SAMN04488101_101534 | Not Available | - | 629776 - 630447 | 25897.8 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04488101_101535 | Not Available | - | 630729 - 633041 | 87590.2 |
| signal transduction histidine kinase | SAMN04488101_101536 | Not Available | - | 633142 - 637275 | 157722.0 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488101_101537 | Not Available | + | 637420 - 638790 | 52119.3 |
| hypothetical protein | SAMN04488101_101538 | Not Available | + | 638800 - 640080 | 48049.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101539 | Not Available | + | 640619 - 643600 | 110907.0 |
| starch-binding associating with outer membrane | SAMN04488101_101540 | Not Available | + | 643619 - 645217 | 59715.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.