Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-like | SAMN04488101_101491 | Not Available | + | 587740 - 588936 | 44813.8 |
| hypothetical protein | SAMN04488101_101492 | Not Available | + | 589034 - 589216 | 7189.14 |
| hypothetical protein | SAMN04488101_101493 | Not Available | + | 589227 - 589736 | 19438.6 |
| protein of unknown function | SAMN04488101_101494 | Not Available | - | 590144 - 590473 | 13012.0 |
| atp-binding cassette, subfamily b | SAMN04488101_101495 | Not Available | - | 590542 - 592332 | 68069.3 |
| leucine dehydrogenase | SAMN04488101_101496 | Not Available | + | 592445 - 593533 | 38929.0 |
| nusb antitermination factor | SAMN04488101_101497 | Not Available | + | 593567 - 594517 | 36802.5 |
| protein of unknown function | SAMN04488101_101498 | Not Available | + | 594522 - 594983 | 16310.5 |
| preprotein translocase subunit yajc | SAMN04488101_101499 | Not Available | + | 595005 - 595331 | 11812.9 |
| ybbr-like protein | SAMN04488101_101500 | Not Available | + | 595434 - 596381 | 36767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.