Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kila-n domain-containing protein | SAMN04488101_1283 | Not Available | - | 6049026 - 6049943 | 34878.7 |
| hypothetical protein | SAMN04488101_1284 | Not Available | - | 6050251 - 6050424 | 6583.97 |
| hypothetical protein | SAMN04488101_1285 | Not Available | + | 6050620 - 6050784 | 6252.29 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488101_1286 | Not Available | - | 6050992 - 6051831 | 31604.9 |
| hypothetical protein | SAMN04488101_1287 | Not Available | - | 6052139 - 6052777 | 23184.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_1288 | Not Available | + | 6053575 - 6054099 | 20782.1 |
| hypothetical protein | SAMN04488101_1289 | Not Available | + | 6054177 - 6054299 | 4717.42 |
| putative membrane protein | SAMN04488101_12810 | Not Available | + | 6054316 - 6054903 | 21370.9 |
| hypothetical protein | SAMN04488101_12811 | Not Available | + | 6055156 - 6055308 | 5365.11 |
| redoxin | SAMN04488101_12812 | Not Available | - | 6055525 - 6057087 | 59784.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.