Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m48 | SAMN04488101_10135 | Not Available | + | 45562 - 46368 | 29058.1 |
| para-aminobenzoate synthetase component 1 | SAMN04488101_10136 | Not Available | - | 46417 - 47685 | 47364.8 |
| adenylosuccinate synthetase | SAMN04488101_10137 | Not Available | - | 47795 - 49072 | 46862.3 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04488101_10138 | Not Available | - | 49106 - 49597 | 19080.7 |
| gtp pyrophosphokinase | SAMN04488101_10139 | Not Available | - | 49661 - 51868 | 83633.2 |
| protein of unknown function | SAMN04488101_10140 | Not Available | + | 52093 - 52710 | 23481.5 |
| glutathione peroxidase | SAMN04488101_10141 | Not Available | + | 52716 - 53198 | 18445.2 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN04488101_10142 | Not Available | + | 53206 - 53922 | 26603.8 |
| glutaryl-coa dehydrogenase | SAMN04488101_10143 | Not Available | + | 53962 - 55323 | 50559.3 |
| hypothetical protein | SAMN04488101_10144 | Not Available | - | 55327 - 55728 | 14978.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.