Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylanthranilate isomerase | SAMN04488101_1258 | Not Available | - | 5959905 - 5960543 | 23623.6 |
| anthranilate phosphoribosyltransferase | SAMN04488101_1259 | Not Available | - | 5960576 - 5961565 | 36161.3 |
| short-chain dehydrogenase | SAMN04488101_12510 | Not Available | - | 5961784 - 5962599 | 29465.3 |
| dna replication and repair protein recr | SAMN04488101_12511 | Not Available | - | 5962605 - 5963222 | 22951.7 |
| na+/proline symporter | SAMN04488101_12512 | Not Available | + | 5963293 - 5964801 | 56146.4 |
| hypothetical protein | SAMN04488101_12513 | Not Available | + | 5964816 - 5965523 | 26858.4 |
| arsenate reductase | SAMN04488101_12514 | Not Available | - | 5965683 - 5966027 | 12998.8 |
| uncharacterized membrane protein | SAMN04488101_12515 | Not Available | - | 5966223 - 5966816 | 21740.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04488101_12516 | Not Available | - | 5966862 - 5969315 | 91100.3 |
| transcriptional regulator, badm/rrf2 family | SAMN04488101_12517 | Not Available | - | 5969508 - 5969972 | 17061.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.