Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_12434 | Not Available | - | 5947277 - 5947810 | 20207.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN04488101_12435 | Not Available | - | 5947877 - 5948581 | 25623.7 |
| hypothetical protein | SAMN04488101_12436 | Not Available | - | 5948596 - 5950929 | 76467.2 |
| transposase | SAMN04488101_1251 | Not Available | - | 5950985 - 5952049 | 40362.6 |
| outer membrane protein beta-barrel family protein | SAMN04488101_1252 | Not Available | + | 5952654 - 5954036 | 52916.9 |
| asparaginyl-trna synthetase | SAMN04488101_1253 | Not Available | + | 5954481 - 5955929 | 55483.1 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN04488101_1254 | Not Available | + | 5956036 - 5956656 | 22918.5 |
| sodium/proton antiporter, nhaa family | SAMN04488101_1255 | Not Available | + | 5956686 - 5957861 | 42085.6 |
| tryptophan synthase, alpha chain | SAMN04488101_1256 | Not Available | - | 5957941 - 5958708 | 27839.4 |
| tryptophan synthase beta chain | SAMN04488101_1257 | Not Available | - | 5958727 - 5959908 | 43165.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.