Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted transcriptional regulator | SAMN04488101_12414 | Not Available | + | 5921354 - 5921737 | 14396.3 |
| blar1 peptidase m56 | SAMN04488101_12415 | Not Available | + | 5921740 - 5923494 | 67185.4 |
| dna replication and repair protein recn | SAMN04488101_12416 | Not Available | + | 5923597 - 5925258 | 61771.1 |
| enoyl-[acyl-carrier-protein] reductase | SAMN04488101_12417 | Not Available | + | 5925319 - 5926137 | 29680.6 |
| carboxypepd_reg-like domain-containing protein | SAMN04488101_12418 | Not Available | + | 5926195 - 5927430 | 47036.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_12419 | Not Available | + | 5927507 - 5928100 | 22837.5 |
| fecr family protein | SAMN04488101_12420 | Not Available | + | 5928183 - 5929175 | 38122.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488101_12421 | Not Available | + | 5929297 - 5932509 | 120328.0 |
| hypothetical protein | SAMN04488101_12422 | Not Available | + | 5932538 - 5933629 | 40787.4 |
| dna repair photolyase | SAMN04488101_12423 | Not Available | + | 5933735 - 5934808 | 40583.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.