Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488101_12221 | Not Available | - | 5832991 - 5834097 | 41119.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_12222 | Not Available | - | 5834172 - 5834741 | 22281.8 |
| hypothetical protein | SAMN04488101_12223 | Not Available | - | 5834843 - 5836015 | 45327.4 |
| hypothetical protein | SAMN04488101_12224 | Not Available | - | 5836094 - 5836537 | 16559.5 |
| glyoxalase-like domain-containing protein | SAMN04488101_12225 | Not Available | - | 5836593 - 5836973 | 13980.7 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488101_12226 | Not Available | + | 5837068 - 5838147 | 40197.0 |
| dimethylhistidine n-methyltransferase | SAMN04488101_12227 | Not Available | - | 5838164 - 5839123 | 36344.4 |
| ergothioneine biosynthesis protein egtb | SAMN04488101_12228 | Not Available | - | 5839128 - 5840279 | 44882.1 |
| hypothetical protein | SAMN04488101_12229 | Not Available | + | 5840369 - 5840521 | 5744.61 |
| transcriptional regulator, arac family | SAMN04488101_12230 | Not Available | + | 5840496 - 5841248 | 28860.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.