Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_1221 | Not Available | - | 5797578 - 5801599 | 142350.0 |
| dinb superfamily protein | SAMN04488101_1222 | Not Available | + | 5802154 - 5802636 | 18149.5 |
| phnb protein | SAMN04488101_1223 | Not Available | + | 5802672 - 5803115 | 16412.5 |
| beta-galactosidase | SAMN04488101_1224 | Not Available | - | 5803173 - 5805032 | 69612.4 |
| hypothetical protein | SAMN04488101_1225 | Not Available | - | 5805385 - 5807439 | 76293.9 |
| dna-binding transcriptional regulator, laci/purr family | SAMN04488101_1226 | Not Available | - | 5807452 - 5808519 | 41233.0 |
| starch-binding associating with outer membrane | SAMN04488101_1227 | Not Available | - | 5808572 - 5810197 | 61669.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_1228 | Not Available | - | 5810216 - 5813287 | 113133.0 |
| calcineurin-like phosphoesterase | SAMN04488101_1229 | Not Available | - | 5813601 - 5814491 | 33715.1 |
| starch-binding associating with outer membrane | SAMN04488101_12210 | Not Available | - | 5814506 - 5816290 | 66865.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.