Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 5792160 - 5792236 | Not Available |
| dna polymerase-3 subunit epsilon | SAMN04488101_12153 | Not Available | - | 5792324 - 5793694 | 51540.2 |
| response regulator receiver domain-containing protein | SAMN04488101_12154 | Not Available | + | 5793845 - 5794216 | 13590.7 |
| putative redox protein | SAMN04488101_12155 | Not Available | - | 5794269 - 5794670 | 14858.8 |
| ktsc domain-containing protein | SAMN04488101_12156 | Not Available | + | 5794745 - 5794945 | 7860.65 |
| colicin import membrane protein | SAMN04488101_12157 | Not Available | - | 5794996 - 5795586 | 20727.1 |
| hypothetical protein | SAMN04488101_12158 | Not Available | - | 5795715 - 5795948 | 8786.57 |
| hypothetical protein | SAMN04488101_12159 | Not Available | - | 5796053 - 5796229 | 6458.78 |
| rna polymerase primary sigma factor | SAMN04488101_12160 | Not Available | - | 5796332 - 5797204 | 32722.7 |
| hypothetical protein | SAMN04488101_12161 | Not Available | - | 5797446 - 5797577 | 4826.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.