Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | SAMN04488101_12142 | Not Available | - | 5778634 - 5780028 | 51963.7 |
| hypothetical protein | SAMN04488101_12143 | Not Available | - | 5780175 - 5780663 | 19337.3 |
| hypothetical protein | SAMN04488101_12144 | Not Available | - | 5780711 - 5781076 | 14328.6 |
| hypothetical protein | SAMN04488101_12145 | Not Available | - | 5781134 - 5782177 | 38771.8 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488101_12146 | Not Available | - | 5782439 - 5783329 | 34097.4 |
| starch-binding associating with outer membrane | SAMN04488101_12147 | Not Available | - | 5783484 - 5785142 | 62263.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_12148 | Not Available | - | 5785163 - 5788552 | 124096.0 |
| fecr family protein | SAMN04488101_12149 | Not Available | - | 5788780 - 5789958 | 44283.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_12150 | Not Available | - | 5790060 - 5790659 | 23142.4 |
| hypothetical protein | SAMN04488101_12151 | Not Available | - | 5791183 - 5791773 | 23406.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.