Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | SAMN04488101_12112 | Not Available | - | 5749810 - 5750265 | 16873.9 |
| bifunctional non-homologous end joining protein ligd | SAMN04488101_12113 | Not Available | - | 5750569 - 5752671 | 79324.7 |
| protein of unknown function | SAMN04488101_12114 | Not Available | - | 5752701 - 5755325 | 97033.8 |
| protein of unknown function | SAMN04488101_12115 | Not Available | - | 5755384 - 5756274 | 34923.0 |
| hypothetical protein | SAMN04488101_12116 | Not Available | - | 5756399 - 5756671 | 10406.2 |
| hypothetical protein | SAMN04488101_12117 | Not Available | + | 5756853 - 5757203 | 13108.7 |
| hypothetical protein | SAMN04488101_12118 | Not Available | - | 5757204 - 5757476 | 10530.8 |
| predicted purr-regulated permease perm | SAMN04488101_12119 | Not Available | - | 5757708 - 5758799 | 39884.4 |
| sigma-70 region 2 | SAMN04488101_12120 | Not Available | - | 5758896 - 5759501 | 23261.3 |
| hypothetical protein | SAMN04488101_12121 | Not Available | - | 5759547 - 5759990 | 17387.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.