Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488101_12067 | Not Available | + | 5718610 - 5720550 | 73922.3 |
| protein of unknown function | SAMN04488101_12068 | Not Available | + | 5720570 - 5721748 | 43943.6 |
| protein of unknown function | SAMN04488101_12069 | Not Available | + | 5721776 - 5722474 | 26487.0 |
| hypothetical protein | SAMN04488101_12070 | Not Available | + | 5722494 - 5723957 | 55800.1 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488101_12071 | Not Available | + | 5724210 - 5725205 | 35594.2 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488101_12072 | Not Available | + | 5725202 - 5726002 | 30061.6 |
| cytochrome c | SAMN04488101_12073 | Not Available | + | 5726046 - 5729138 | 114388.0 |
| nucleoside transporter | SAMN04488101_12074 | Not Available | + | 5729171 - 5730385 | 44702.2 |
| predicted dehydrogenase | SAMN04488101_12075 | Not Available | + | 5730391 - 5731160 | 28243.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488101_1211 | Not Available | + | 5731161 - 5733530 | 82432.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.