Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488101_1207 | Not Available | - | 5655087 - 5657939 | 107536.0 |
| hypothetical protein | SAMN04488101_1208 | Not Available | + | 5657945 - 5658184 | 9342.51 |
| yidc/oxa1 family membrane protein insertase | SAMN04488101_1209 | Not Available | - | 5658114 - 5659913 | 68272.0 |
| ctp synthase | SAMN04488101_12010 | Not Available | - | 5659934 - 5661550 | 59859.1 |
| glpgli family protein | SAMN04488101_12011 | Not Available | - | 5661706 - 5662470 | 29567.8 |
| carboxypepd_reg-like domain-containing protein | SAMN04488101_12012 | Not Available | - | 5662471 - 5665257 | 103975.0 |
| hypothetical protein | SAMN04488101_12013 | Not Available | - | 5665984 - 5666517 | 20658.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN04488101_12014 | Not Available | - | 5666514 - 5667236 | 27144.4 |
| deoxyadenosine/deoxycytidine kinase | SAMN04488101_12015 | Not Available | - | 5667238 - 5667852 | 23790.2 |
| tryptophanyl-trna synthetase | SAMN04488101_12016 | Not Available | - | 5667923 - 5668921 | 37507.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.