Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_11972 | Not Available | - | 5645764 - 5645958 | 7710.29 |
| cro/c1-type hth dna-binding domain-containing protein | SAMN04488101_11973 | Not Available | + | 5646305 - 5646574 | 10172.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN04488101_11974 | Not Available | + | 5646574 - 5647128 | 21517.1 |
| hypothetical protein | SAMN04488101_11975 | Not Available | - | 5647139 - 5647360 | 8420.16 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN04488101_1201 | Not Available | + | 5647361 - 5650054 | 95580.7 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488101_1202 | Not Available | + | 5650061 - 5651056 | 36805.2 |
| outer membrane transport energization protein tonb (tc 2.c.1.1.1) | SAMN04488101_1203 | Not Available | + | 5651193 - 5652020 | 29791.7 |
| modulator of drug activity b | SAMN04488101_1204 | Not Available | - | 5652091 - 5652708 | 23616.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04488101_1205 | Not Available | + | 5652804 - 5653700 | 34435.6 |
| spore maturation protein spma | SAMN04488101_1206 | Not Available | - | 5653753 - 5655024 | 45303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.