Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase enzyme family protein | SAMN04488101_11962 | Not Available | + | 5637126 - 5638025 | 33884.5 |
| hypothetical protein | SAMN04488101_11963 | Not Available | + | 5638027 - 5638860 | 30801.8 |
| hypothetical protein | SAMN04488101_11964 | Not Available | - | 5639009 - 5639215 | 7931.6 |
| aaa domain-containing protein | SAMN04488101_11965 | Not Available | - | 5639271 - 5641820 | 95482.1 |
| hypothetical protein | SAMN04488101_11966 | Not Available | + | 5642028 - 5642786 | 30149.1 |
| hypothetical protein | SAMN04488101_11967 | Not Available | + | 5642889 - 5643155 | 10090.3 |
| hypothetical protein | SAMN04488101_11968 | Not Available | + | 5643152 - 5643460 | 11813.3 |
| hypothetical protein | SAMN04488101_11969 | Not Available | + | 5643713 - 5644285 | 22380.5 |
| hypothetical protein | SAMN04488101_11970 | Not Available | + | 5644288 - 5645271 | 37672.9 |
| hypothetical protein | SAMN04488101_11971 | Not Available | - | 5645418 - 5645699 | 11088.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.