Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_11932 | Not Available | + | 5592810 - 5595884 | 112805.0 |
| starch-binding associating with outer membrane | SAMN04488101_11933 | Not Available | + | 5595897 - 5597597 | 64665.8 |
| protein of unknown function | SAMN04488101_11934 | Not Available | + | 5597622 - 5599004 | 49952.0 |
| beta-fructofuranosidase | SAMN04488101_11935 | Not Available | + | 5599037 - 5600593 | 57404.3 |
| fructan beta-fructosidase | SAMN04488101_11936 | Not Available | + | 5600621 - 5602126 | 56106.5 |
| hypothetical protein | SAMN04488101_11937 | Not Available | + | 5602243 - 5602386 | 5486.82 |
| lysophospholipase l1 | SAMN04488101_11938 | Not Available | - | 5602514 - 5603347 | 31827.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_11939 | Not Available | + | 5603483 - 5604028 | 20771.2 |
| acetyl esterase/lipase | SAMN04488101_11940 | Not Available | + | 5604107 - 5604964 | 31207.9 |
| fecr family protein | SAMN04488101_11941 | Not Available | + | 5605057 - 5606208 | 42807.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.